Comparison of phenotype classification used in the mutant collections of TRIM, Tos17 and IRRI-IR64.
The plant ontology developed by Gramene is also listed.

TRIM Category TRIM ID TRIM phenotype TOS17 ID TOS17 Class TOS17 Phenotype Phenotype ID, IRRI Observable PO Term ID Attribute PATO Term ID Trait TO Term ID Trait Value
Development 1 germination rate 1 Germination Germination rate IRFGC:0050 Germination GRO:0007043 rate PATO:0007147 Germination rate TO:0000430 slow
2 lethal 2 Growth Lethal IRFGC:0080 Seedling/vegetative stage GRO:0007047 viability PATO:00000168 Seedling/vegetative vigor (Vg) TO:0000296 yellow lethal
3 abnormal growth 3 Growth abnormal growth -- -- -- -- -- -- -- --
4 weak 4 Growth Weak IRFGC:0081 Seedling/vegetative stage GRO:0007047 viability PATO:00000168 Seedling/vegetative vigor (Vg) TO:0000296 weak
Leaf color 11 albino 11 Leaf color Albino IRFGC:0020 Leaf blade PO:0020039 color PATO:0000033 Leaf blade color (LBC) TO:0000326 albino
12 yellow 12 Leaf color Yellow IRFGC:0021 Leaf blade PO:0020039 color PATO:0000033 Leaf blade color (LBC) TO:0000326 chlorina
12 yellow 12 Leaf color Yellow IRFGC:0030 Leaf blade PO:0020039 color PATO:0000033 Leaf blade color (LBC) TO:0000326 almost white
13 dark green 13 Leaf color Deep green leaf IRFGC:0022 Leaf blade PO:0020039 color PATO:0000033 Leaf blade color (LBC) TO:0000326 dark green
14 pale green 14 Leaf color Pale green leaf IRFGC:0023 Leaf blade PO:0020039 color PATO:0000033 Leaf blade color (LBC) TO:0000326 light green
15 bluish green 15 Leaf color Virescent IRFGC:0024 Leaf blade PO:0020039 color PATO:0000033 Leaf blade color (LBC) TO:0000326 virescent
16 stripe 16 Leaf color Stripe IRFGC:0025 Leaf blade PO:0020039 color PATO:0000033 Leaf blade color (LBC) TO:0000326 fine stripe
16 stripe 16 Leaf color Stripe IRFGC:0027 Leaf blade PO:0020039 color PATO:0000033 Leaf blade color (LBC) TO:0000326 white stripe
16 stripe 16 Leaf color Stripe IRFGC:0028 Leaf blade PO:0020039 color PATO:0000033 Leaf blade color (LBC) TO:0000326 yellow stripe
16 stripe 16 Leaf color Stripe IRFGC:0029 Leaf blade PO:0020039 color PATO:0000033 Leaf blade color (LBC) TO:0000326 white midrib
16 stripe 16 Leaf color Stripe IRFGC:0031 Leaf blade PO:0020039 color PATO:0000033 Leaf blade color (LBC) TO:0000326 light green stripe
17 zebra 17 Leaf color Zebra IRFGC:0026 Leaf blade PO:0020039 color PATO:0000033 Leaf blade color (LBC) TO:0000326 zebra
18 others 18 Leaf color Others IRFGC:0006 Basal leaf sheath PO:0020040 color PATO:0000033 Basal leaf sheath color (BLSC) TO:0000367 purple
18 others 18 Leaf color Others IRFGC:0007 Basal leaf sheath PO:0020040 color PATO:0000033 Basal leaf sheath color (BLSC) TO:0000367 red
18 others 18 Leaf color Others IRFGC:0008 Basal leaf sheath PO:0020040 color PATO:0000033 Basal leaf sheath color (BLSC) TO:0000367 dark brown
18 others 18 Leaf color Others IRFGC:0032 Leaf blade PO:0020039 color PATO:0000033 Leaf blade color (LBC) TO:0000326 white edge
Leaf morphology 21 wide 21 Leaf shape Wide leaf -- -- -- -- -- -- -- --
22 narrow 22 Leaf shape Narrow leaf IRFGC:0042 Leaf PO:0009025 width PATO:0000084 Leaf width TO:0000492 narrow
23 long 23 Leaf shape Long leaf IRFGC:0033 Leaf PO:0009025 length PATO:0010077 Leaf length TO:0000492 long
23 long 23 Leaf shape Long leaf -- -- -- -- -- -- -- --
24 short 24 Leaf shape Short leaf IRFGC:0034 Leaf PO:0009025 length PATO:0010077 Leaf length TO:0000492 short
25 drooping 25 Leaf shape Drooping leaf -- -- -- -- -- -- TO:0000206 leaf angle
26 rolled 26 Leaf shape Rolled leaf IRFGC:0037 Leaf PO:0009025 related trait Unknown Leaf related trait Unknown semi-rolled
26 rolled 26 Leaf shape Rolled leaf IRFGC:0036 Leaf PO:0009025 related trait Unknown Leaf related trait Unknown rolled
27 spiral 27 Leaf shape Spiral IRFGC:0038 Leaf PO:0009025 related trait Unknown Leaf related trait Unknown crinkled
28 brittle 28 Leaf shape Brittle IRFGC:0085 Stem PO:0009047 strength Unknown Stem strength TO:0000051 brittle
29 thin lamina joint 29 Leaf shape Lamina joint IRFGC:0052 Leaf PO:0009025 shape PATO:0000130 Leaf shape TO:0000492 --
30 white and withering leaf tip 30 Leaf shape Withering IRFGC:0040 Leaf PO:0009025 senescence Unknown Leaf senescence (Sen) TO:0001036
30 white and withering leaf tip 30 Leaf shape Withering IRFGC:0039 Leaf PO:0009025 related trait Unknown Leaf related trait Unknown wilted upper half
31 others 31 Leaf shape Others IRFGC:0015 Flag leaf PO:0020103 length PATO:0010077 Flag leaf length Unknown long
Plant type 41 semidwarf 41 Height Semidwarf IRFGC:0063 Plant PO:0009011 height PATO:0000074 Plant height (Ht) TO:0000207 semidwarf
42 dwarf 42 Height Dwarf IRFGC:0064 Plant PO:0009011 height PATO:0000074 Plant height (Ht) TO:0000207 dwarf
43 severe dwarf 43 Height Extremely dwarf IRFGC:0065 Plant PO:0009011 height PATO:0000074 Plant height (Ht) TO:0000207 extreme dwarf
44 long culm 44 Height Long culm IRFGC:0066 Plant PO:0009011 height PATO:0000074 Plant height (Ht) TO:0000207 tall
45 erect 45 Height Erect IRFGC:0009 Culm PO:0009047 angle PATO:0000124 Culm angle (CmA) TO:0000427 erect
45 erect 45 Height Erect IRFGC:0019 Leaf PO:0009025 angle PATO:0000124 Leaf angle (LA) TO:0000206 erect
46 lazy 46 Height Lazy IRFGC:0011 Culm PO:0009047 angle PATO:0000124 Culm angle (CmA) TO:0000427 procumbent
47 thin culm 47 Height Thin culm IRFGC:0013 Culm PO:0009047 diameter Unknown Culm diameter TO:0001035 stem width
48 thick culm 48 Height Thick culm IRFGC:0012 Culm PO:0009047 diameter Unknown Culm diameter TO:0001035 stem width
49 others -- -- IRFGC:0014 Culm PO:0009047 senescence Unknown Culm senescence Unknown premature
49 others -- -- IRFGC:0086 Stem PO:0009047 strength Unknown Stem strength TO:0000051 stiff
Lesion 51 lesion mimic 51 Mimic response Spl/Lesion mimic IRFGC:0046 Plant PO:0009011 response, mimic Unknown mimic response TO:0000063 lesion mimic-spl6 type
51 lesion mimic 51 Mimic response Spl/Lesion mimic IRFGC:0047 Plant PO:0009011 response, mimic Unknown mimic response TO:0000063 lesion mimic-uncharacterized
51 lesion mimic 51 Mimic response Spl/Lesion mimic IRFGC:0048 Plant PO:0009011 response, mimic Unknown mimic response TO:0000063 lesion mimic-spl11 type
51 lesion mimic 51 Mimic response Spl/Lesion mimic IRFGC:0049 Plant PO:0009011 response, mimic Unknown mimic response TO:0000063 lesion mimic-spl1 type
Tiller 61 high-position tiller 61 Tillering High tillering IRFGC:0088 Tiller PO:0006343 yield PATO:00000153 Tillering ability (TI) TO:0000329 very high
62 low-position tiller 62 Tillering Low tillering IRFGC:0089 Tiller PO:0006343 yield PATO:00000153 Tillering ability (TI) TO:0000329 low
62 low-position tiller 62 Tillering Low tillering IRFGC:0090 Tiller PO:0006343 yield PATO:00000153 Tillering ability (TI) TO:0000329 very low
63 monoculm 63 Tillering Lazy IRFGC:0010 Culm PO:0009047 angle PATO:0000124 Culm angle (CmA) TO:0000427 spreading
64 few panicle Tillering-- -- -- Tiller -- -- -- -- -- --
65 Many panicle Tillering -- -- Tiller -- -- -- -- -- --
Heading date 71 early heading 65 Heading date Early heading IRFGC:0016 Heading GRO:0007044 relative time PATO:0000147 Heading time TO:0000137 early
72 late heading 66 Heading date Late heading IRFGC:0017 Heading GRO:0007044 relative time PATO:0000147 Heading time TO:0000137 late
73 no heading 67 Heading date No heading -- -- -- -- -- -- -- --
Glume 75 abnormal hull 71 Flower Abnormal hull IRFGC:0069 Seed PO:0009010 related trait Unknown Seed related trait TO:0000184 open hull
75 abnormal hull 71 Flower Abnormal hull IRFGC:0070 Seed PO:0009010 related trait Unknown Seed related trait TO:0000184 beaked hull
75 abnormal hull 71 Flower Abnormal hull IRFGC:0071 Seed PO:0009010 related trait Unknown Seed related trait TO:0000184 half hull
75 abnormal hull 71 Flower Abnormal hull IRFGC:0072 Seed PO:0009010 related trait Unknown Seed related trait TO:0000184 double palea
75 abnormal hull 71 Flower Abnormal hull IRFGC:0073 Seed PO:0009010 related trait Unknown Seed related trait TO:0000184 multiple lemma and palea
75 abnormal hull 71 Flower Abnormal hull IRFGC:0074 Seed PO:0009010 related trait Unknown Seed related trait TO:0000184 depressed palea
75 abnormal hull 71 Flower Abnormal hull IRFGC:0075 Seed PO:0009010 related trait Unknown Seed related trait TO:0000184 triangular
76 abnormal floral organ 72 Flower Abnormal floral organ IRFGC:0051 Shoot PO:0009006 abnormal PATO:0000004 Shoot growth TO:0000077 abnormal
76 abnormal floral organ 72 Flower Abnormal floral organ IRFGC:0053 Floret PO:0006318 shape PATO:0000130 Abnormal floral organ TO:0000499 abnormal
77 awn 73 Flower Awn IRFGC:0001 Awning PO:0006032 shape PATO:0000130 Awning (An) TO:0000072 long & partly awned
77 awn 73 Flower Awn IRFGC:0002 Awning PO:0006032 shape PATO:0000130 Awning (An) TO:0000072 short & partly awned
77 awn 73 Flower Awn IRFGC:0003 Awning PO:0006032 shape PATO:0000130 Awning (An) TO:0000072 awned
77 awn 73 Flower Awn IRFGC:0004 Awning PO:0006032 shape PATO:0000130 Awning (An) TO:0000072 long awn
77 awn 73 Flower Awn IRFGC:0005 Awning PO:0006032 shape PATO:0000130 Awning (An) TO:0000072 short awn
78 abnormal glume 74 Flower Abnormal hull IRFGC:0076 Seed PO:0009010 related trait Unknown Seed related trait TO:0000184 extra glume
79 abnormal lemma color 75 Flower Abnormal lemma color -- -- -- -- -- -- TO:0000264 lemma and palea color
Panicle 81 long panicle 81 Panicle Long panicle -- -- -- -- -- -- -- --
82 short panicle 82 Panicle Short panicle IRFGC:0057 Panicle PO:0009049 length PATO:0010077 Panicle length (PnL) TO:0000040 short
83 lax panicle 83 Panicle Lax panicle IRFGC:0061 Panicle PO:0009049 type Unknown Panicle type (PnT) TO:0000089 open
84 dense panicle 84 Panicle Dense panicle IRFGC:0062 Panicle PO:0009049 type Unknown Panicle type (PnT) TO:0000089 compact
85 vivipary 85 Panicle Vivipary IRFGC:0054 Panicle PO:0009049 status Unknown Panicle status TO:0000619 viviparous
86 shattering 86 Panicle Shattering IRFGC:0059 Panicle PO:0009049 threshability PATO:0300094 Panicle threshability (Thr) TO:0000406 loose
86 shattering 86 Panicle Shattering IRFGC:0060 Panicle PO:0009049 threshability PATO:0300094 Panicle threshability (Thr) TO:0000406 easy
87 neck leaf 87 Panicle Neck leaf IRFGC:0058 Panicle PO:0009049 related trait Unknown panicle related trait TO: 0002691 peduncle length
87 neck leaf 87 Panicle Neck leaf IRFGC:0056 Panicle PO:0009049 exsertion Unknown Panicle exsertion (Exs) TO:0000165 partly exserted
88 abnormal panicle 88 Panicle Abnormal panicle shape IRFGC:0091 Internode PO:0020142 length PATO:0010077 (Uppermost) internode length TO:0000145 elongated
89 others 89 Panicle Abnormal panicle shape IRFGC:0018 Internode PO:0020142 length PATO:0010077 (Uppermost) internode length TO:0000145 short
89 others 89 Panicle Abnormal panicle shape IRFGC:0055 Panicle PO:0009049 axis Unknown Panicle axis (PnA) TO:0000342 straight
Fertility 91 sterile 91 Sterility Sterile IRFGC:0082 Spikelet PO:0009051 fertility PATO:00000171 Spikelet fertility (SpFert) TO:0000180 completely sterile
91 sterile 91 Sterility Sterile IRFGC:0083 Spikelet PO:0009051 fertility PATO:00000171 Spikelet fertility (SpFert) TO:0000180 highly sterile
92 low fertility 92 Sterility Low Fertile IRFGC:0084 Spikelet PO:0009051 fertility PATO:00000171 Spikelet fertility (SpFert) TO:0000180 partly sterile
Grain 101 large grain 101 Seed Large grain IRFGC:0077 Seed PO:0009010 size PATO:0000058 Seed size TO:0000391 big
102 small grain 102 Seed Small grain IRFGC:0078 Seed PO:0009010 size PATO:0000058 Seed size TO:0000391 small
102 small grain 102 Seed Small grain IRFGC:0041 Leaf PO:0009025 width PATO:0000084 Leaf width TO:0000492 wide
102 small grain 102 Seed Small grain IRFGC:0079 Seed PO:0009010 width PATO:0000084 Seed width TO:0000149 wide
103 slender grain 103 Seed Slender grain -- -- -- -- -- -- TO:0000411 seed length to width ratio
104 others 104 Seed Others IRFGC:0068 Seed PO:0009010 length PATO:0010077 Seed length TO:0000146 short
104 others 104 Seed Others IRFGC:0043 Floret PO:0006318 color PATO:0000033 Lemma and palea color (LmPC) TO:0000264 brown
104 others 104 Seed Others IRFGC:0044 Floret PO:0006318 color PATO:0000033 Lemma and palea color (LmPC) TO:0000264 gold
104 others 104 Seed Others IRFGC:0045 Floret PO:0006318 color PATO:0000033 Lemma and palea color (LmPC) TO:0000264 brown spots on straw
104 others 104 Seed Others IRFGC:0067 Seed PO:0009010 length PATO:0010077 Seed length TO:0000146 long
104 others 104 Seed Others IRFGC:0087 Sterile lemma PO:0009040 length PATO:0010077 Sterile lemma length (SLmL) TO:0000240 long